| Place | Performance | Athlete | Team |
| 1 | 0:46.46 | ANELE - NZWANZWA | SOUTH AFRICA |
| 2 | 0:46.63 | TUMISANG - SHEZI | SOUTH AFRICA |
| 3 | 0:46.67 | SESHOKA - KAGO | UNIVERSITY OF BOTSWANA AC |
| 4 | 0:46.85 | ARON - OOKEDITSE | UNIVERSITY OF BOTSWANA AC |
| 5 | 0:47.37 | MASILO - BOITUMELO | JWANENG ATHLETICS CLUB |
| 6 | 0:47.77 | SELEKA - LEFATSHE | JWANENG ATHLETICS CLUB |
| 7 | 0:47.85 | KEOLOPILE - ONALENNA | UNIVERSITY OF BOTSWANA AC |
| 8 | 0:48.54 | OMPHILE - SERIBE | FRANCISTOWN ATHLETICS CLUB |
| 9 | 0:48.67 | REETSANG - GIVEN | NATE |